PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3AL_6E92D4E1F.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 80aa    MW: 9117.11 Da    PI: 9.2097
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3AL_6E92D4E1F.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.75e-28869159
                           ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                           ldDg++WrKYGqK++ g+++pr+Y+rCt++   gC + k+v+r++ dp +++++Y+g+H++ 
  Traes_3AL_6E92D4E1F.1  8 LDDGFSWRKYGQKDILGAKYPRAYFRCTHRhtqGCYASKQVQRAHGDPLLFDVVYHGNHTCA 69
                           59***************************98999**************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081121.482366IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-27369IPR003657WRKY domain
SuperFamilySSF1182904.45E-26469IPR003657WRKY domain
SMARTSM007742.9E-38870IPR003657WRKY domain
PfamPF031062.8E-26968IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
SVEDVGPLDD GFSWRKYGQK DILGAKYPRA YFRCTHRHTQ GCYASKQVQR AHGDPLLFDV  60
VYHGNHTCAQ GKHSNSQRPQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lex_A7e-151661072Probable WRKY transcription factor 4
1wj2_A7e-151661072Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8274011e-131KR827401.1 Triticum aestivum WRKY50 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006664979.13e-45PREDICTED: probable WRKY transcription factor 41
SwissprotQ8H0Y86e-32WRK41_ARATH; Probable WRKY transcription factor 41
TrEMBLW5CDR12e-55W5CDR1_WHEAT; Uncharacterized protein
TrEMBLA0A0M3Q8N65e-55A0A0M3Q8N6_WHEAT; WRKY50 transcriptional factor
STRINGMLOC_44455.12e-52(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33553183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-33WRKY family protein
Publications ? help Back to Top
  1. Wang X, et al.
    Expression of TaWRKY44, a wheat WRKY gene, in transgenic tobacco confers multiple abiotic stress tolerances.
    Front Plant Sci, 2015. 6: p. 615
    [PMID:26322057]